How to view the Savu output

In DAWN

Open a new terminal window and type:

>>> module load dawn
>>> dawn &

Choose the Data Browsing perspective and click on File -> open, navigate to an output folder and click on the .nxs file.

Warning

The DAWN module must be loaded in a separate terminal as it will reset relevant paths.

In Avizo

Start avizo

>>> module load avizo
>>> avizo

In Avizo GUI, Click on Open Data /(File->Open Data). This should show a dialog box with list of output data entries. To view final output select entry/final_result_tomo/data and press OK button. This will load the data.

  1. 2D view

To view 2D slices, Select the data, right click and a pop up will be shown as below. Select Ortho Slice and Click ok button to show a 2D slice.
../_images/2dview.jpg

  1. 3D view

To view 3D volume, Select the data, right click on it and a pop up will be shown as below. Select Volume Rendering and Click OK button to show a 3D volume.
../_images/3dview.jpg